In Virtua Fighter 3tb, if the player selects Shun and begins a mirror match, then selects the stage "Wolf" and achieves an EXCELLENT rating during the fight, then makes sure they land the winning blow as Shun's back is facing the dark part of the sky, Shun will perform his victory pose as the camera pans in just the right manner to reveal a cultural Japanese representation of a snowman that blinks. The Easter egg might be a joke regarding desert mirages, as Wolf is a desert setting and this Easter Egg is exclusive to this stage.

In Virtua Fighter 3tb, it's possible for the player to summon the train from Sarah's Subway stage in the background of the Desert City stage. In order to do this, the player must play as Jeffry, highlight the Desert City stage, hold Start on a second controller and let the stage select timer count down. When the match starts, perform Jeffry's throw command "Toe Kick of Doom". If done correctly, a train will rise up in the background and fly around the skybox of the stage until the end of the match.

The flying train is most likely a reference to Leiji Matsumoto's manga series Galaxy Express 999.

In Virtua Fighter 3tb, Jacky and Kage both have a secret win pose when holding Down, Guard, Punch, and Evade. They will perform "V for Victory" poses. If Kage is in his 2P costume and gets an "Excellent" victory on Akira's stage, he will perform a secret win pose where a metal pan will fall on his head.